All-atom universal binder generation (BoltzGen)

Практический сценарий

Frontier all-atom binder design across proteins, peptides, nanobodies. Preprint.

Вход

Pipeline diagram

All-atom generation
→
Integrated ranking
→
Independent prediction + assays
Mermaid diagram
flowchart TD
    A[Target + design spec] --> B[BoltzGen all-atom diffusion]
    B --> C[Integrated folding/ranking]
    C --> D[Independent validation]
    D --> E[Experimental assays]

Стадии pipeline

СтадияАрхитектурный классЧто происходитГенерация или оценкаGeneratorПромежуточный объектАльтернативы
All-atom generationAll-atom diffusion unified with foldingГенерируется binder sequence–structuregenerationboltzgenBinder complexesBindCraft, RFantibody
Integrated rankingUnified folding/rankingIn-model rankingevaluationNRRanked designsNR
Independent prediction + assaysExternalОбязательная независимая проверкаexternal_evaluationNRHitsNR

Hardware и runtime

NR. MIT code + weights, but preprint.

Evidence level

3–4 prospective claimed in preprint; evidence differs by modality. Not full IgG evidence.

Точки отказа

Критерии решения

Связанные задачи

Target-conditioned binder generation, De novo VHH / nanobody design

Связанные инструменты

BoltzGen

Архитектуры

Joint sequence–structure diffusion

Papers

BoltzGen: universal binder design